2′-Deoxyguanosine-5′-Diphosphate

Status : experimental

Chemical Classification

This compound belongs to the class of organic compounds known as purine ribonucleoside diphosphates. These are purine ribobucleotides with diphosphate group linked to the ribose moiety.

Purine ribonucleoside diphosphates

Organic compounds

Nucleosides, nucleotides, and analogues

Purine nucleotides

Purine ribonucleotides

Calculated Property

kind Value Source
logP -1.4 ALOGPS
logS -2.1 ALOGPS
Water Solubility 3.60e+00 g/l ALOGPS
logP -2.6 ChemAxon
IUPAC Name [({[(2S,3R,5R)-5-(2-amino-6-oxo-6,9-dihydro-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid ChemAxon
Traditional IUPAC Name {[(2S,3R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy(hydroxy)phosphoryl}oxyphosphonic acid ChemAxon
Molecular Weight 427.2011 ChemAxon
Monoisotopic Weight 427.029414749 ChemAxon
SMILES NC1=NC2=C(N=CN2[C@H]2C[C@@H](O)[C@H](CO[P@](O)(=O)OP(O)(O)=O)O2)C(=O)N1 ChemAxon
Molecular Formula C10H15N5O10P2 ChemAxon
InChI InChI=1S/C10H15N5O10P2/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(24-6)2-23-27(21,22)25-26(18,19)20/h3-6,16H,1-2H2,(H,21,22)(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6-/m1/s1 ChemAxon
InChIKey InChIKey=CIKGWCTVFSRMJU-NGJCXOISSA-N ChemAxon
Polar Surface Area (PSA) 228.05 ChemAxon
Refractivity 84.86 ChemAxon
Polarizability 34.01 ChemAxon
Rotatable Bond Count 6 ChemAxon
H Bond Acceptor Count 11 ChemAxon
H Bond Donor Count 6 ChemAxon
pKa (strongest acidic) 1.97 ChemAxon
pKa (strongest basic) 1.36 ChemAxon
Physiological Charge -2 ChemAxon
Number of Rings 3 ChemAxon
Bioavailability 0 ChemAxon
Rule of Five 0 ChemAxon
Ghose Filter 0 ChemAxon
MDDR-Like Rule 1 ChemAxon

Target within organism

  • Nucleoside diphosphate kinase A : in Human